Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916075.1_cds_XP_016465767.1_58688
CDS Infomation

[gene=LOC107788594] [db_xref=GeneID:107788594] [protein=type I inositol polyphosphate 5-phosphatase 2-like] [protein_id=XP_016465767.1] [location=complement(join(104256..104457,104567..104715,104911..105019,106307..106497,106865..107636,107727..107831,107903..108071,108154..108259,108332..108367))] [gbkey=CDS]
Sequence

ATGCTAATGAAAGCCAGAAGAGGAAGGAGATCTCAGGCCTTTTGGCCCTCCATTGTGATG
AAGAAATGGCTGAATATTGCTCCTAAAGTGTATGATTTTAGTGAAGATGAAGTTGACACT
GAAATGGAGAGTGAGGATGATGCTTGCTCTCTCAAAGATGAAAGGGTGCTTGAAGATCAC
GGACATAGAAAACCGGGGAAGCTTAATGAATGCCAGACTCAAACTGAATTGTATTGCTCA
GGGAAACCAAGACACAGGAGAGGGAAATCAGAAACGTTGAGAGTTGAGTATATTAACAAG
AAAGATGTGAGAGTTACAGTAGGTACTTGGAATGTGGCTGGAAGACTTCCAGATGAGGAT
CTAGACATTGATGAATGGATTCATATGCAAGAACCTGCAGATATCTATATTCTTGGCTTC
CAAGAGGTGGTCCCACTGAGTGCTGGAAATGTACTGGGAGCAGAAAATAGAAGACAAGTT
CCAAAATGGGAAGCCATCATCCGAAGAACATTAAACAGGACACAAAAACCTGAACCTAAG
ATCAAGAGTTATAGTGCTCCACCATCTCCAGTTTTAAGGACTTCTTCTGCTGCTGACATA
ATTGTTGATATGGTTGATACTCCTGCGCTGGATATGATGGCAGATGCATCACTGGACACA
ACTTCGTTTCGTGAAAACAACCTAGGAAAGAGTATACATTTCTATGGCACTGAGTGTGAT
AGTAGATTTGATTGGCCTGAACGTTCACTTGATGCAACACCTCAAGTTCTTTCTTCTAGT
TTCAAGTTGAGGAGAGTCTTGAGTAGTTGCGCGACAGTTGGTTTTGGTAGCATAGTCAAC
CCTCTTGCTTTTGATGGCAGAGGGTTAAAGAGGGTGCACCAAAGCTCAGGAAACTTAGGA
TTAATGTGGATGGATCAACAAGATGTACCTGTACTTGTTGATTCTCTTTCTGATGGCTCT
CCTGACGAGGAAAATGACTTGTTTGAAGAATTTCCAGAGGTCAACAAAGAAGAAAGTTCA
CTTCTAAATCATGCAGTGAAGTCACGTCCAATGTATGTTCGTATTGTCAGCAAGCAGATG
GTTGGTATATATGTATCAGTTTGGGTACGTAGAAGATTGAGGAGGCACATAAACAACTTG
CAAGTCTCTTCTGTTGGTATTGGACTAATGGGGTACATGGGCAATAAGGGATCTGTTTCT
GTGAGCATGTCTCTTTTCCAGTCATGGCTATGCTTTGTTTGTTCTCATTTGTCATCTGGT
CAAAAGGATGGAGCTGAGCAAAGGCGTAACACTGATGTCAATGAAATCATGAGGCGTACT
CGTTTCTCATCCATATTTGACACAGATGCAGATGAACCACAAACAATTCCATCTCATGAT
CAGATATTCTGGTTTGGAGATTTAAATTATCGAATCAGTATGGTAGATACTGAAGTACGG
AAGCTTATCGCCAATAAGCAATGGAATGAACTTCTCAATAGTGATCAGTTAAGCAAAGAA
CTCCGAAATGGACATGTCTTTGCTGGTTGGAAGGAAGGGTTGATTAACTTTGCTCCAACT
TACAAGTATGAAATCAACAGTGATAGATACAATGGAGAAATTCCAAGAGAAGGGGAAAAG
AAGAGATCACCAGCATGGTGTGATCGTATACTCTGGTTTGGAAATGGTATAAAACAGCTC
CTCTACAAGCGAGCAGAACTAAGACTATCAGATCATCGGCCTGTAAGTTCAATGTTCTCA
GTACAAGTGGAAATATTTGACCACAGAAAGCTACAGAGAGTTCTAAATGTTAACAACGCT
GCTATACATCCTGAGATTCTGCTTGAAACGGGAGAGTAA

Peptide Sequence

PEP ID

XP_016465767.1
PEP Infomation

PREDICTED: type I inositol polyphosphate 5-phosphatase 2-like [Nicotiana tabacum]
Sequence

MLMKARRGRRSQAFWPSIVMKKWLNIAPKVYDFSEDEVDTEMESEDDACSLKDERVLEDH
GHRKPGKLNECQTQTELYCSGKPRHRRGKSETLRVEYINKKDVRVTVGTWNVAGRLPDED
LDIDEWIHMQEPADIYILGFQEVVPLSAGNVLGAENRRQVPKWEAIIRRTLNRTQKPEPK
IKSYSAPPSPVLRTSSAADIIVDMVDTPALDMMADASLDTTSFRENNLGKSIHFYGTECD
SRFDWPERSLDATPQVLSSSFKLRRVLSSCATVGFGSIVNPLAFDGRGLKRVHQSSGNLG
LMWMDQQDVPVLVDSLSDGSPDEENDLFEEFPEVNKEESSLLNHAVKSRPMYVRIVSKQM
VGIYVSVWVRRRLRRHINNLQVSSVGIGLMGYMGNKGSVSVSMSLFQSWLCFVCSHLSSG
QKDGAEQRRNTDVNEIMRRTRFSSIFDTDADEPQTIPSHDQIFWFGDLNYRISMVDTEVR
KLIANKQWNELLNSDQLSKELRNGHVFAGWKEGLINFAPTYKYEINSDRYNGEIPREGEK
KRSPAWCDRILWFGNGIKQLLYKRAELRLSDHRPVSSMFSVQVEIFDHRKLQRVLNVNNA
AIHPEILLETGE

Transcript Sequence

Gene sequence data has not been registered.